*Exploring the Frontiers of Brain Research and Innovation*
The human brain, a complex and enigmatic organ, continues to be a subject of intense study and fascination. Recent advancements in neuroscience have shed light on the intricate workings of the brain and opened new avenues for treating neurological disorders.
*New Insights into Brain Disorders*
A groundbreaking study has revealed potential causes for brain disorders that manifest without any apparent injury. This research highlights the importance of medical compassion and understanding in treating Functional Neurological Disorder (FND), a condition where patients exhibit physical symptoms caused by abnormal brain functioning⁵.
*Deciphering the Human Brain*
The BRAIN Initiative, launched in 2013, aims to enhance our comprehension of the human brain. Early findings from this initiative are promising, offering valuable insights into psychiatric, neurodegenerative, and neurodevelopmental disorders⁶.
*Innovations in Neuroscience*
Neuroscience has seen several exciting discoveries recently. One such innovation is the development of adaptive deep brain stimulation (DBS) for treating severe depression. This method involves implanting electrodes in the brain to deliver electrical currents, adapting to the patient's neural patterns to alleviate symptoms¹.
Another remarkable invention is a device that extends human hearing capabilities, allowing us to perceive ultrasonic frequencies similar to bats. This technology could revolutionize biological research and enhance our sensory experience¹.
*The Future of Brain Science*
These studies and inventions represent just the tip of the iceberg in our quest to understand the brain. With each discovery, we move closer to unraveling the mysteries of the mind and improving the quality of life for those affected by brain diseases.
This diffusion can be measured in DTI scans, which in turn can be used to indirectly measure white matter integrity and structural connectivity between different areas of the brain. A common use of DTI is to compare different populations, such as young and old, and to observe where fractional anisotropy (FA) differs between groups, possibly with the assumption that less FA can be indicative of less efficient communication between cortical regions. There are other applications as well, but this is the one we will focus on for the remainder of the tutorials.
The data that we will be using can be found on the FSL course website, after scrolling down to Data Files and downloading File 2 (melodic and diffusion). I haven't been able to find any good online repositories for DTI data, so we'll be working with a relatively small sample of three subjects in one group, and three subjects in the other. Also note that while we will focus on FSL, there are many other tools that process DTI data, including some new commands in AFNI, and also a program called TORTOISE. As with most things I post about, these methods have already been covered in detail by others; and in particular I recommend a blog called blog.cogneurostats.com, which covers both the AFNI and TORTOISE approaches to DTI, along with other tutorials that I thought I had been the first to cover, but which have actually already been discussed in detail. I encourage you to check it out - but also to come back, eventually.
By Andrew Jahn at July 30, 2014
Labels: cogneurostats, diffusion tensor imaging, DTI, FSL, introduction, psychotic nurse
https://andysbrainblog.blogspot.com/2014/07/introduction-to-diffusion-tensor.html
Diffusion Tensor Imaging (DTI) has become increasingly common in traumatic brain injury lawsuits as a means to argue the presence of brain damage that does not appear on any other forms of neuroimaging. DTI is an experimental MRI technique that measures how water molecules flow in the brain. Often plaintiff experts claim that DTI can detect changes in white matter (nerve fibers between neurons in the brain) that are undetectable by other forms of imaging, and cite this as evidence of brain damage. However, more and more research shows that DTI detects white matter changes from causes other than trauma. For instance, a study this month out of the University of Alberta examined young adults between the ages of 14 to 17 with a history of mental health issues (depression, anxiety, ADHD) to determine the functioning of their white matter. Each individual received DTIs to examine the white matter within their brain. These scans were then compared to a second set of adolescents of the same age group who had no history of mental illness.
The conclusion of the study showed a clinically significant difference in the connections of the neural pathways in those previously diagnosed with a mental health issue. Compared to their healthy peers, those with mental health issues had more difficulty in their decision-making and cognitive control. In fact, the results tell us these adolescents have “less neural efficiency” which has impacted not only their attention in general, but their ability to focus across their different environments.
This study again shows that differences on DTI are not per se evidence of a TBI. It is essential in any case involving DTI to make sure to understand not only the imaging findings and their implications for a particular individual, but also to explore the specific reliability and methodological shortcomings inherent to this form of neuroimaging.
https://www.porterrennie.com/blog/diffusion-tensor-imaging-traumatic-brain-injury
Diffusion Tensor Imaging (DTI) is a type of magnetic resonance imaging (MRI) technique that is able to detect brain injuries that affect the integrity of white matter tracts, which are the lines of communication in your brain. Without white matter, the brain would consist of four different sections, or lobes, that are responsible for various functions, but could not work together. Imagine you’re a remote employee working on an important team project, but your internet is down and you are unable to communicate with anyone else in your office. You have all the files necessary to complete your part of the project, but you can’t share them with the rest of your team. White matter tracts are like your brain’s internet connectivity – allowing all the sections of the brain to communicate with each other. When these are damaged, the different lobes of your brain cannot talk to each other, leading to common symptoms such as memory problems, mood changes, and balance issues.
DTI works by measuring the diffusion of water molecules within the white matter tracts, which means it looks towards the molecules’ movements. In normal white matter, water diffuses in the direction of a specific white matter tract. When the molecules encounter barriers, such as cell membranes, DTI can map the directionality of white matter tracts. It can detect when these water molecules move in a more chaotic manner which would indicate damage caused by a brain injury. These disruptions to the normal organization of white matter tracts can indicate issues such as traumatic brain injury, stroke, or multiple sclerosis.
For example, in a TBI, the impact can cause damage to axons (the long, thin projections of nerve cells that form the white matter tracts). This damage can disrupt the directional diffusion of water molecules (what we touched on above), leading to changes in the DTI signal that can be visualized on a DTI map. These changes can help identify the location and extent of the injury, as well as the severity of the damage.
Think of marbles rolling down a track. A stick is placed in front of them and does not allow the marbles to flow down as they should. Now they start bouncing all over the place. DTI can locate that bouncing and tell us that there was likely an injury to the track. The severity of that bouncing tells us how severe the injury is. Where the bouncing and chaos starts tells us where the injury is.
Overall, DTI has become a valuable new tool to not only to detect brain injuries and their severity, but also monitor their progression.
In legal cases, DTI can be used as a tool to provide evidence of brain injury or damage, particularly in cases of traumatic brain injury (TBI). What sets DTI apart from, say, MRI, is that it can be used to demonstrate how an injury has affected an individual’s cognitive or motor functions, which is extremely relevant in personal injury cases. For example, suppose an individual has suffered a TBI as a result of a car accident. In that case, DTI could be used to demonstrate how the injury has affected their ability to drive or perform other tasks.
When it comes to minor brain injuries, often an MRI will not reveal any noticeable structural damage. On the other hand, DTI’s intricate dive further into the inner workings of the brain can detect such minor brain injuries. And remember, just because a brain injury is minor, does not mean it does not affect one’s everyday life and potentially come with lifelong side effects.
The State of Colorado follows what is called the Daubert standard in determining the admissibility of scientific evidence into trial. The case, Daubert v. Merrell Dow Pharmaceuticals Inc., 509 U.S. 579 (1993), was a United States Supreme Court Case that held that the admissibility of scientific evidence is based on determining whether there is valid methodology based on: (1) whether the theory or technique in question can be and has been tested; (2) whether it has been subjected to peer review and publication; (3) its known or potential error rate; (4) the existence and maintenance of standards controlling its operation; and (5) whether it has attracted widespread acceptance within a relevant scientific community. In order for the scientific evidence to be admitted, all five of those elements must be met.
In personal injury cases, defense attorneys will spend a lot of energy on fighting the admissibility of scientific evidence because it can hold a whole lot of weight with a jury, especially if it can prove that an “invisible injury” is much more extensive than it seems on its surface. That is why these relatively new technologies such as DTI are so integral to the legal field – it gives the injured party’s trial team more ammo to present to the jury. So, it is almost inevitable that a defense attorney will attack DTI because of the damning evidence that it can present. They may go after its reliability by trying to present various outlier studies to bar its admission. Or they may attack how it is relatively new and there is not enough evidence to understand DTI’s true effectiveness.
Fortunately for the good guys, DTI is already gaining a lot of traction as an acceptable method to determine the extent of brain injuries. Courts across the country have admitted DTI into evidence leaving the defense to try and counter it at trial. However, a knowledgeable, properly trained, and well-spoken expert for the plaintiff will generally have minimal issues convincing a jury of DTI’s effectiveness in diagnosing and understanding the severity of brain injuries.
https://coloradoinjurylaw.com/blog/diffusion-tensor-imaging-in-personal-injury-cases/
Last revised by Arlene Campos on 7 May 2024
Diffusion tensor imaging (DTI) is an MRI technique that uses anisotropic diffusion to estimate the axonal (white matter) organisation of the brain.
Fibre tractography (FT) is a 3D reconstruction technique to assess neural tracts using data collected by diffusion tensor imaging.
Diffusion-weighted imaging (DWI) is based on the measurement of thermal Brownian motion of water molecules. Within cerebral white matter, water molecules tend to diffuse more freely along the direction of axonal fascicles rather than across them. Such directional dependence of diffusivity is termed anisotropy. This direction of maximum diffusivity along the white-matter fibres is projected in the final image.
Clinical applications
For many, diffusion tensor imaging is synonymous with MRI of the CNS. However, its use for the assessment of highly-organised body systems outside the CNS, where anisotropy can facilitate early detection of pathology, has been gaining favour.
Applications include:
assessment of the deformation of white matter by tumours - deviation, infiltration, destruction of white matter
delineation of the anatomy of immature brains
presurgical planning
Alzheimer disease - detection of early disease
multiple sclerosis - plaque assessment
early identification of musculoskeletal and peripheral nerve pathology 7-10
Quantitative analysis methods
ROI (region of interest) based
voxel-based
histogram analysis
tractography/fibre tracking
Physics of diffusion tensor imaging (DTI)
Some terms:
diffusion tensor imaging (DTI) provides a quantitative analysis of the magnitude and directionality of water molecules
the word tensor indicates the use of a 3x3 matrix with eigenvalues and eigenvectors as its constituents
the two main parameters derived from DTI data are mean diffusivity (MD), also referred to as apparent diffusion coefficient (ADC), and fractional anisotropy (FA)
FA reflects the directionality of molecular displacement by diffusion and varies between 0 (isotropic diffusion) and 1 (infinite anisotropic diffusion). FA value of CSF is 0
MD reflects the average magnitude of molecular displacement by diffusion. The higher the MD value, the more isotropic the medium
AD - axial diffusivity represents the longest eigenvector
RD - radial diffusivity represents the average of two shorter eigenvectors
DTI data acquisition is done by SE-EPI with the application of diffusion gradients in multiple directions (SE-EPI = spin-echo echo-planar imaging, using pairs of 90-180 degree pulses, giving T2-weighting)
Colour coding
In fibre tractography imaging, the convention for colour coding is as follows:
red: transverse fibres
green: anteroposterior fibres
blue: craniocaudal fibres
Fibres with oblique orientation are represented with colours originating from the combination of the three primary colours:
red + blue = magenta
green + red = yellow
green + blue = cyan 15
Limitations of fibre tractography
The rationale of the tractographic algorithms lies in the presupposition that in each voxel, the direction of the main eigenvector coincides with the average direction of a single fibre bundle. The approach, therefore, leads to a correct result only if the region of interest is homogeneous and, the direction variations of the fasciculi are of the order of size of the voxels. It follows that where more bundles of fibres coexist or where they cross, approach, converge or diverge, the algorithm works poorly. These limits, in clinical practice, could lead to following paths that do not exist (false positive) or to not adequately follow paths that exist (false negative); therefore, the interpretation of tractographic reconstructions requires prior experience and knowledge 11-14.
Other limitations include, the inability of the algorithm to distinguish the direction of the neural pathway (afferent from efferent projections), to determine its function and to identify the presence of synapses along the course of the same neural pathway.
link:- https://radiopaedia.org/articles/diffusion-tensor-imaging-and-fibre-tractography-1